Government of the country of residence may offer scholarship program for students to study in Japan and other countries. Confirm with your university office or government office in charge of education for information on availability and eligibility regarding such scholarships.
Government of the country (city) of residence and Japanese municipalities (prefectures, cities) may have an exchange agreement which offers scholarship program for international students. Confirm with your university office or government office in charge of education for information on availability and eligibility regarding such scholarships.
Individual application can be made for scholarships that do not require university recommendation on the application form. Notice on available scholarships will be posted on the website and bulletin boards as they arrive.
Scholarships may be open for application without notice to the university. JASSO website has more detailed information about Scholarships for Study in Japan.